Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.13■□□□□ 0.81
Ubr3Q5U430 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Ubr3Q5U430 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Gm13597-201ENSMUST00000121239 375 ntBASIC20.12■□□□□ 0.81
Ubr3Q5U430 Gm27321-201ENSMUST00000185021 205 ntBASIC20.12■□□□□ 0.81
Ubr3Q5U430 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ubr3Q5U430 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr3Q5U430 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.12■□□□□ 0.81
Ubr3Q5U430 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr3Q5U430 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Mir6956-201ENSMUST00000183598 62 ntBASIC20.1■□□□□ 0.81
Ubr3Q5U430 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr3Q5U430 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Gm27300-201ENSMUST00000184085 97 ntBASIC20.09■□□□□ 0.81
Ubr3Q5U430 Gm27335-201ENSMUST00000184758 97 ntBASIC20.09■□□□□ 0.81
Ubr3Q5U430 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.09■□□□□ 0.81
Ubr3Q5U430 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.09■□□□□ 0.81
Ubr3Q5U430 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr3Q5U430 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.09■□□□□ 0.81
Ubr3Q5U430 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.09■□□□□ 0.81
Ubr3Q5U430 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr3Q5U430 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr3Q5U430 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr3Q5U430 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Ubr3Q5U430 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ubr3Q5U430 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr3Q5U430 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.06■□□□□ 0.8
Ubr3Q5U430 Gm14057-201ENSMUST00000120631 482 ntBASIC20.06■□□□□ 0.8
Ubr3Q5U430 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr3Q5U430 Gm17968-201ENSMUST00000194902 784 ntBASIC20.06■□□□□ 0.8
Ubr3Q5U430 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms