Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom1Q5SX79 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom1Q5SX79 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shroom1Q5SX79 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom1Q5SX79 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.64■□□□□ 0.42
Shroom1Q5SX79 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shroom1Q5SX79 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Shroom1Q5SX79 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom1Q5SX79 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Shroom1Q5SX79 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms