Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-4Q5R1H9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Prob1-201ENSMUST00000097619 3021 ntBASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7d-4Q5R1H9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms