Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Dio3-201ENSMUST00000097228 1449 ntBASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Mir8112-201ENSMUST00000184382 131 ntBASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8d-1Q5R1H8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Gm18666-201ENSMUST00000190039 958 ntBASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8d-1Q5R1H8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Gm12527-201ENSMUST00000117967 564 ntBASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Gm37856-201ENSMUST00000191634 999 ntBASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8d-1Q5R1H8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8d-1Q5R1H8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms