Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Odf3b-204ENSMUST00000227834 930 ntBASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-3Q5R1E6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-3Q5R1E6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-3Q5R1E6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-3Q5R1E6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-3Q5R1E6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gm10653-202ENSMUST00000139570 835 ntBASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms