Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.27■□□□□ 0.03
Urb1Q571H0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.03
Urb1Q571H0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
Urb1Q571H0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Urb1Q571H0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
Urb1Q571H0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Urb1Q571H0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Urb1Q571H0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Gm13186-201ENSMUST00000118031 316 ntBASIC15.26■□□□□ 0.03
Urb1Q571H0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Gm6296-201ENSMUST00000222599 943 ntBASIC15.26■□□□□ 0.03
Urb1Q571H0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Urb1Q571H0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Urb1Q571H0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.25■□□□□ 0.03
Urb1Q571H0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Urb1Q571H0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.25■□□□□ 0.03
Urb1Q571H0 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.25■□□□□ 0.03
Urb1Q571H0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Urb1Q571H0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.25■□□□□ 0.03
Urb1Q571H0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Gm15467-201ENSMUST00000120582 445 ntBASIC15.24■□□□□ 0.03
Urb1Q571H0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.24■□□□□ 0.03
Urb1Q571H0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Gm13036-201ENSMUST00000117799 748 ntBASIC15.24■□□□□ 0.03
Urb1Q571H0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Urb1Q571H0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Urb1Q571H0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms