Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.63■□□□□ 0.57
Srrm1Q52KI8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm1Q52KI8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm1Q52KI8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Gm12260-201ENSMUST00000122447 411 ntBASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm1Q52KI8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Gm15467-201ENSMUST00000120582 445 ntBASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.6■□□□□ 0.57
Srrm1Q52KI8 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm1Q52KI8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm23935-201ENSMUST00000102303 57 ntBASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm24270-201ENSMUST00000102326 57 ntBASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm24245-201ENSMUST00000157318 57 ntBASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm6736-201ENSMUST00000166583 948 ntBASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm1Q52KI8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm1Q52KI8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm1Q52KI8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm1Q52KI8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm1Q52KI8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.58■□□□□ 0.57
Srrm1Q52KI8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.58■□□□□ 0.56
Srrm1Q52KI8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms