Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.69■□□□□ 0.9
Shank3Q4ACU6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank3Q4ACU6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Mir3113-201ENSMUST00000175478 76 ntBASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Gm9172-201ENSMUST00000212092 954 ntBASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank3Q4ACU6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shank3Q4ACU6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank3Q4ACU6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank3Q4ACU6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.64■□□□□ 0.9
Shank3Q4ACU6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shank3Q4ACU6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shank3Q4ACU6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shank3Q4ACU6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.64■□□□□ 0.89
Shank3Q4ACU6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shank3Q4ACU6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.64■□□□□ 0.89
Shank3Q4ACU6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shank3Q4ACU6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Gm14057-201ENSMUST00000120631 482 ntBASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms