Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.26■□□□□ 0.51
Bbof1Q3V079 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Gm2274-201ENSMUST00000184539 609 ntBASIC18.26■□□□□ 0.51
Bbof1Q3V079 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bbof1Q3V079 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Il3ra-202ENSMUST00000223589 738 ntBASIC18.25■□□□□ 0.51
Bbof1Q3V079 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.25■□□□□ 0.51
Bbof1Q3V079 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bbof1Q3V079 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.24■□□□□ 0.51
Bbof1Q3V079 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.24■□□□□ 0.51
Bbof1Q3V079 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bbof1Q3V079 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Gm7889-201ENSMUST00000185591 958 ntBASIC18.23■□□□□ 0.51
Bbof1Q3V079 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Bbof1Q3V079 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.23■□□□□ 0.51
Bbof1Q3V079 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bbof1Q3V079 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Gm13836-201ENSMUST00000121159 501 ntBASIC18.22■□□□□ 0.51
Bbof1Q3V079 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Gm9987-201ENSMUST00000069768 567 ntBASIC18.22■□□□□ 0.51
Bbof1Q3V079 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Bbof1Q3V079 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.22■□□□□ 0.51
Bbof1Q3V079 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms