Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrfip1Q3UZ39 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrfip1Q3UZ39 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrfip1Q3UZ39 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 AA414768-201ENSMUST00000121924 1257 ntBASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrfip1Q3UZ39 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrfip1Q3UZ39 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrfip1Q3UZ39 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrfip1Q3UZ39 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrfip1Q3UZ39 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms