Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Gm2756-201ENSMUST00000195851 400 ntBASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Ddx41-204ENSMUST00000224765 2199 ntBASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Arhgef40Q3UPH7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Arhgef40Q3UPH7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Arhgef40Q3UPH7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Arhgef40Q3UPH7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Arhgef40Q3UPH7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC24.39■■□□□ 1.5
Arhgef40Q3UPH7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Auts2-212ENSMUST00000178555 309 ntBASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Gm10576-201ENSMUST00000191927 825 ntBASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Arhgef40Q3UPH7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Gm13036-201ENSMUST00000117799 748 ntBASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Gm6858-201ENSMUST00000208582 1468 ntBASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Arhgef40Q3UPH7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 AV026068-213ENSMUST00000223675 1171 ntBASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Gm15590-201ENSMUST00000078419 552 ntBASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Arhgef40Q3UPH7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC24.36■■□□□ 1.49
Arhgef40Q3UPH7 Gm14822-201ENSMUST00000122247 291 ntBASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 AC154222.1-201ENSMUST00000223882 475 ntBASIC24.35■■□□□ 1.49
Arhgef40Q3UPH7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Gm14140-201ENSMUST00000119999 995 ntBASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Gm27628-201ENSMUST00000184911 107 ntBASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms