Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rapgef1Q3UHC1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rapgef1Q3UHC1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Rapgef1Q3UHC1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Gm13216-201ENSMUST00000117145 591 ntBASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Gm6659-201ENSMUST00000174752 547 ntBASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rapgef1Q3UHC1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Gm10013-201ENSMUST00000106074 672 ntBASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Haglr-201ENSMUST00000100000 2085 ntBASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rapgef1Q3UHC1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rapgef1Q3UHC1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rapgef1Q3UHC1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms