Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Gm43433-201ENSMUST00000196573 481 ntBASIC15.29■□□□□ 0.04
Spg11Q3UHA3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg11Q3UHA3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Gm12490-201ENSMUST00000120255 560 ntBASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Idnk-204ENSMUST00000226010 1898 ntBASIC15.27■□□□□ 0.04
Spg11Q3UHA3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Spg11Q3UHA3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm43630-201ENSMUST00000201550 776 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Spg11Q3UHA3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms