Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Brf2Q3UAW9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.65■□□□□ 0.1
Brf2Q3UAW9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf2Q3UAW9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Gm2274-201ENSMUST00000184539 609 ntBASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf2Q3UAW9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.63■□□□□ 0.09
Brf2Q3UAW9 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf2Q3UAW9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf2Q3UAW9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Brf2Q3UAW9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms