Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm14057-201ENSMUST00000120631 482 ntBASIC19.68■□□□□ 0.74
Col5a2Q3U962 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.68■□□□□ 0.74
Col5a2Q3U962 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Col5a2Q3U962 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.68■□□□□ 0.74
Col5a2Q3U962 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col5a2Q3U962 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.67■□□□□ 0.74
Col5a2Q3U962 Gm25406-201ENSMUST00000157599 105 ntBASIC19.67■□□□□ 0.74
Col5a2Q3U962 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.67■□□□□ 0.74
Col5a2Q3U962 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.67■□□□□ 0.74
Col5a2Q3U962 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col5a2Q3U962 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gm9172-201ENSMUST00000212092 954 ntBASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.66■□□□□ 0.74
Col5a2Q3U962 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col5a2Q3U962 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.65■□□□□ 0.74
Col5a2Q3U962 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Gm5682-201ENSMUST00000173402 505 ntBASIC19.65■□□□□ 0.74
Col5a2Q3U962 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.65■□□□□ 0.74
Col5a2Q3U962 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.65■□□□□ 0.74
Col5a2Q3U962 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.65■□□□□ 0.74
Col5a2Q3U962 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.65■□□□□ 0.74
Col5a2Q3U962 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col5a2Q3U962 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col5a2Q3U962 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col5a2Q3U962 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Gm8396-201ENSMUST00000057361 823 ntBASIC19.64■□□□□ 0.73
Col5a2Q3U962 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.64■□□□□ 0.73
Col5a2Q3U962 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col5a2Q3U962 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col5a2Q3U962 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a2Q3U962 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a2Q3U962 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col5a2Q3U962 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col5a2Q3U962 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.63■□□□□ 0.73
Col5a2Q3U962 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms