Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Mir1895-201ENSMUST00000122615 79 ntBASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Gm27300-201ENSMUST00000184085 97 ntBASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Gm27335-201ENSMUST00000184758 97 ntBASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vars2Q3U2A8 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.62■□□□□ 0.89
Vars2Q3U2A8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Gm27494-201ENSMUST00000184735 189 ntBASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vars2Q3U2A8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vars2Q3U2A8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Mir7023-201ENSMUST00000185093 64 ntBASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vars2Q3U2A8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Gm44492-201ENSMUST00000197012 141 ntBASIC20.59■□□□□ 0.89
Vars2Q3U2A8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vars2Q3U2A8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Gm45167-201ENSMUST00000208007 322 ntBASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vars2Q3U2A8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vars2Q3U2A8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vars2Q3U2A8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vars2Q3U2A8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vars2Q3U2A8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vars2Q3U2A8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms