Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.44□□□□□ -0.1
Q3U1D9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3U1D9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Q3U1D9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.43□□□□□ -0.1
Q3U1D9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Q3U1D9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Q3U1D9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.43□□□□□ -0.1
Q3U1D9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.43□□□□□ -0.1
Q3U1D9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Q3U1D9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Q3U1D9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Q3U1D9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Q3U1D9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.42□□□□□ -0.1
Q3U1D9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Q3U1D9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.42□□□□□ -0.1
Q3U1D9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.42□□□□□ -0.1
Q3U1D9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Q3U1D9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Q3U1D9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Q3U1D9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.42□□□□□ -0.1
Q3U1D9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.41□□□□□ -0.1
Q3U1D9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.41□□□□□ -0.1
Q3U1D9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Q3U1D9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.41□□□□□ -0.1
Q3U1D9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.41□□□□□ -0.1
Q3U1D9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Q3U1D9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Q3U1D9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.4□□□□□ -0.1
Q3U1D9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Q3U1D9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.4□□□□□ -0.1
Q3U1D9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Q3U1D9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.4□□□□□ -0.1
Q3U1D9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Q3U1D9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.4□□□□□ -0.1
Q3U1D9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3U1D9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3U1D9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.39□□□□□ -0.11
Q3U1D9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.39□□□□□ -0.11
Q3U1D9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Q3U1D9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.39□□□□□ -0.11
Q3U1D9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.39□□□□□ -0.11
Q3U1D9 Gm10052-201ENSMUST00000168019 960 ntBASIC14.39□□□□□ -0.11
Q3U1D9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Q3U1D9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Gm7729-201ENSMUST00000050143 801 ntBASIC14.39□□□□□ -0.11
Q3U1D9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms