Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.66■□□□□ 0.58
Pdlim7Q3TJD7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Gm7506-201ENSMUST00000207758 815 ntBASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim7Q3TJD7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Pdlim7Q3TJD7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim7Q3TJD7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim7Q3TJD7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Gm14140-201ENSMUST00000119999 995 ntBASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pdlim7Q3TJD7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim7Q3TJD7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim7Q3TJD7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms