Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Odf3b-204ENSMUST00000227834 930 ntBASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cul4aQ3TCH7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cul4aQ3TCH7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cul4aQ3TCH7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cul4aQ3TCH7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cul4aQ3TCH7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Gm3375-201ENSMUST00000203929 796 ntBASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cul4aQ3TCH7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cul4aQ3TCH7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms