Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna5Q2MKA5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Gm14822-201ENSMUST00000122247 291 ntBASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Gm6550-201ENSMUST00000187574 993 ntBASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna5Q2MKA5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gm8097-201ENSMUST00000117903 829 ntBASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gm11780-201ENSMUST00000136880 516 ntBASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gm6089-201ENSMUST00000197666 938 ntBASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna5Q2MKA5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Gm14140-201ENSMUST00000119999 995 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 AV026068-213ENSMUST00000223675 1171 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna5Q2MKA5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Gm13036-201ENSMUST00000117799 748 ntBASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Gm4459-201ENSMUST00000118750 468 ntBASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna5Q2MKA5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna5Q2MKA5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms