Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ebf1Q07802 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.8■□□□□ 0.28
Ebf1Q07802 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.8■□□□□ 0.28
Ebf1Q07802 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.8■□□□□ 0.28
Ebf1Q07802 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Gm43347-201ENSMUST00000200226 580 ntBASIC16.8■□□□□ 0.28
Ebf1Q07802 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.8■□□□□ 0.28
Ebf1Q07802 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ebf1Q07802 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf1Q07802 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf1Q07802 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf1Q07802 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.79■□□□□ 0.28
Ebf1Q07802 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ebf1Q07802 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ebf1Q07802 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ebf1Q07802 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf1Q07802 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ebf1Q07802 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Gm13884-201ENSMUST00000118103 829 ntBASIC16.78■□□□□ 0.28
Ebf1Q07802 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Gm27000-201ENSMUST00000182943 842 ntBASIC16.78■□□□□ 0.28
Ebf1Q07802 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ebf1Q07802 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf1Q07802 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gm11336-201ENSMUST00000118168 334 ntBASIC16.77■□□□□ 0.28
Ebf1Q07802 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Ebf1Q07802 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf1Q07802 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf1Q07802 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.77■□□□□ 0.27
Ebf1Q07802 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Ebf1Q07802 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf1Q07802 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf1Q07802 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf1Q07802 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ebf1Q07802 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Ebf1Q07802 Gm15372-201ENSMUST00000120729 834 ntBASIC16.76■□□□□ 0.27
Ebf1Q07802 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.76■□□□□ 0.27
Ebf1Q07802 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ebf1Q07802 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ebf1Q07802 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf1Q07802 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.75■□□□□ 0.27
Ebf1Q07802 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms