Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm5112-201ENSMUST00000204407 2368 ntBASIC12.23□□□□□ -0.45
Hspg2Q05793 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm5745-201ENSMUST00000183748 313 ntBASIC12.23□□□□□ -0.45
Hspg2Q05793 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.22□□□□□ -0.45
Hspg2Q05793 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.22□□□□□ -0.45
Hspg2Q05793 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Hspg2Q05793 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hspg2Q05793 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hspg2Q05793 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hspg2Q05793 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hspg2Q05793 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hspg2Q05793 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hspg2Q05793 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.21□□□□□ -0.45
Hspg2Q05793 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.21□□□□□ -0.46
Hspg2Q05793 Mir3113-201ENSMUST00000175478 76 ntBASIC12.21□□□□□ -0.46
Hspg2Q05793 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.21□□□□□ -0.46
Hspg2Q05793 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hspg2Q05793 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hspg2Q05793 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Hspg2Q05793 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hspg2Q05793 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.2□□□□□ -0.46
Hspg2Q05793 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.2□□□□□ -0.46
Hspg2Q05793 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.2□□□□□ -0.46
Hspg2Q05793 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.2□□□□□ -0.46
Hspg2Q05793 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.2□□□□□ -0.46
Hspg2Q05793 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.2□□□□□ -0.46
Hspg2Q05793 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hspg2Q05793 AA543401-201ENSMUST00000164248 1269 ntBASIC12.2□□□□□ -0.46
Hspg2Q05793 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.2□□□□□ -0.46
Hspg2Q05793 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hspg2Q05793 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms