Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smn1P97801 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.31□□□□□ -0.12
Smn1P97801 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Smn1P97801 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smn1P97801 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smn1P97801 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smn1P97801 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Smn1P97801 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.3□□□□□ -0.12
Smn1P97801 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.3□□□□□ -0.12
Smn1P97801 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Gm18025-201ENSMUST00000221733 862 ntBASIC14.3□□□□□ -0.12
Smn1P97801 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smn1P97801 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smn1P97801 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smn1P97801 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.29□□□□□ -0.12
Smn1P97801 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smn1P97801 Gm27405-201ENSMUST00000184201 112 ntBASIC14.29□□□□□ -0.12
Smn1P97801 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.29□□□□□ -0.12
Smn1P97801 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.29□□□□□ -0.12
Smn1P97801 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smn1P97801 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smn1P97801 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.29□□□□□ -0.12
Smn1P97801 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.29□□□□□ -0.12
Smn1P97801 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smn1P97801 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smn1P97801 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.28□□□□□ -0.12
Smn1P97801 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.28□□□□□ -0.12
Smn1P97801 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smn1P97801 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.28□□□□□ -0.12
Smn1P97801 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smn1P97801 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smn1P97801 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smn1P97801 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smn1P97801 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Smn1P97801 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.27□□□□□ -0.12
Smn1P97801 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smn1P97801 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms