Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43bP86448 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43bP86448 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim43bP86448 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim43bP86448 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim43bP86448 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.11■□□□□ 0.33
Trim43bP86448 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Gm5417-201ENSMUST00000079706 384 ntBASIC17.11■□□□□ 0.33
Trim43bP86448 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim43bP86448 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.11■□□□□ 0.33
Trim43bP86448 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43bP86448 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Trim43bP86448 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43bP86448 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43bP86448 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim43bP86448 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Trim43bP86448 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim43bP86448 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim43bP86448 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43bP86448 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43bP86448 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43bP86448 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trim43bP86448 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim43bP86448 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43bP86448 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim43bP86448 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim43bP86448 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim43bP86448 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim43bP86448 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.08■□□□□ 0.32
Trim43bP86448 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim43bP86448 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43bP86448 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim43bP86448 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Trim43bP86448 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms