Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atf1P81269 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.4□□□□□ -0.1
Atf1P81269 Gm21814-202ENSMUST00000203277 873 ntBASIC14.4□□□□□ -0.1
Atf1P81269 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Atf1P81269 Gm10812-201ENSMUST00000099864 546 ntBASIC14.4□□□□□ -0.1
Atf1P81269 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Atf1P81269 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.4□□□□□ -0.1
Atf1P81269 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.4□□□□□ -0.1
Atf1P81269 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf1P81269 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atf1P81269 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.39□□□□□ -0.11
Atf1P81269 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.39□□□□□ -0.11
Atf1P81269 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.39□□□□□ -0.11
Atf1P81269 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.39□□□□□ -0.11
Atf1P81269 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atf1P81269 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atf1P81269 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.38□□□□□ -0.11
Atf1P81269 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf1P81269 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Atf1P81269 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atf1P81269 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atf1P81269 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.38□□□□□ -0.11
Atf1P81269 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.38□□□□□ -0.11
Atf1P81269 Mir5122-201ENSMUST00000175004 89 ntBASIC14.38□□□□□ -0.11
Atf1P81269 Gm27463-201ENSMUST00000183569 57 ntBASIC14.38□□□□□ -0.11
Atf1P81269 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Atf1P81269 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atf1P81269 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Atf1P81269 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.37□□□□□ -0.11
Atf1P81269 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.37□□□□□ -0.11
Atf1P81269 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.37□□□□□ -0.11
Atf1P81269 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atf1P81269 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf1P81269 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf1P81269 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms