Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CiitaP79621 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CiitaP79621 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CiitaP79621 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.02■□□□□ 0.47
CiitaP79621 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CiitaP79621 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CiitaP79621 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CiitaP79621 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
CiitaP79621 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.01■□□□□ 0.47
CiitaP79621 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.01■□□□□ 0.47
CiitaP79621 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CiitaP79621 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CiitaP79621 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CiitaP79621 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CiitaP79621 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CiitaP79621 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Gm15442-201ENSMUST00000117905 1527 ntBASIC18■□□□□ 0.47
CiitaP79621 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18■□□□□ 0.47
CiitaP79621 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18■□□□□ 0.47
CiitaP79621 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18■□□□□ 0.47
CiitaP79621 Gm9954-202ENSMUST00000198686 4725 ntBASIC18■□□□□ 0.47
CiitaP79621 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CiitaP79621 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CiitaP79621 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CiitaP79621 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.99■□□□□ 0.47
CiitaP79621 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.99■□□□□ 0.47
CiitaP79621 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.99■□□□□ 0.47
CiitaP79621 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CiitaP79621 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
CiitaP79621 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CiitaP79621 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.98■□□□□ 0.47
CiitaP79621 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.98■□□□□ 0.47
CiitaP79621 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CiitaP79621 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.98■□□□□ 0.47
CiitaP79621 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CiitaP79621 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CiitaP79621 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CiitaP79621 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CiitaP79621 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.97■□□□□ 0.47
CiitaP79621 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.97■□□□□ 0.47
CiitaP79621 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.97■□□□□ 0.47
CiitaP79621 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.97■□□□□ 0.47
CiitaP79621 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CiitaP79621 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CiitaP79621 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CiitaP79621 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms