Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ufd1P70362 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ufd1P70362 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ufd1P70362 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ufd1P70362 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Gm13401-201ENSMUST00000117074 291 ntBASIC14.33□□□□□ -0.12
Ufd1P70362 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.33□□□□□ -0.12
Ufd1P70362 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.33□□□□□ -0.12
Ufd1P70362 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.33□□□□□ -0.12
Ufd1P70362 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ufd1P70362 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ufd1P70362 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ufd1P70362 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.32□□□□□ -0.12
Ufd1P70362 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ufd1P70362 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.32□□□□□ -0.12
Ufd1P70362 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.32□□□□□ -0.12
Ufd1P70362 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ufd1P70362 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.32□□□□□ -0.12
Ufd1P70362 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ufd1P70362 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.31□□□□□ -0.12
Ufd1P70362 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.31□□□□□ -0.12
Ufd1P70362 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ufd1P70362 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ufd1P70362 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ufd1P70362 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ufd1P70362 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms