Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.51■□□□□ 0.23
Crnkl1P63154 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.5■□□□□ 0.23
Crnkl1P63154 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Crnkl1P63154 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.49■□□□□ 0.23
Crnkl1P63154 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.49■□□□□ 0.23
Crnkl1P63154 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.49■□□□□ 0.23
Crnkl1P63154 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Crnkl1P63154 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Crnkl1P63154 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Crnkl1P63154 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Crnkl1P63154 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Crnkl1P63154 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.48■□□□□ 0.23
Crnkl1P63154 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Gm29791-202ENSMUST00000207888 369 ntBASIC16.48■□□□□ 0.23
Crnkl1P63154 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.48■□□□□ 0.23
Crnkl1P63154 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Crnkl1P63154 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Crnkl1P63154 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.47■□□□□ 0.23
Crnkl1P63154 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Crnkl1P63154 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Crnkl1P63154 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Crnkl1P63154 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.47■□□□□ 0.23
Crnkl1P63154 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.47■□□□□ 0.23
Crnkl1P63154 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms