Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsm3P62311 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Lsm3P62311 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsm3P62311 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsm3P62311 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lsm3P62311 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lsm3P62311 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsm3P62311 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsm3P62311 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Lsm3P62311 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lsm3P62311 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsm3P62311 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.25■□□□□ 0.03
Lsm3P62311 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Lsm3P62311 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Gm10418-201ENSMUST00000100943 576 ntBASIC15.24■□□□□ 0.03
Lsm3P62311 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.24■□□□□ 0.03
Lsm3P62311 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm3P62311 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.24■□□□□ 0.03
Lsm3P62311 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsm3P62311 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lsm3P62311 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Lsm3P62311 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Lsm3P62311 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.24■□□□□ 0.03
Lsm3P62311 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.23■□□□□ 0.03
Lsm3P62311 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm3P62311 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.23■□□□□ 0.03
Lsm3P62311 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.23■□□□□ 0.03
Lsm3P62311 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lsm3P62311 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm3P62311 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.23■□□□□ 0.03
Lsm3P62311 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm3P62311 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Lsm3P62311 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm3P62311 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm3P62311 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms