Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp46P62069 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp46P62069 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp46P62069 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.39■□□□□ 0.37
Usp46P62069 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.39■□□□□ 0.37
Usp46P62069 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp46P62069 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.39■□□□□ 0.37
Usp46P62069 Gm44450-201ENSMUST00000199528 114 ntBASIC17.39■□□□□ 0.37
Usp46P62069 Gm18115-201ENSMUST00000221209 621 ntBASIC17.39■□□□□ 0.37
Usp46P62069 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp46P62069 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp46P62069 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp46P62069 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp46P62069 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp46P62069 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp46P62069 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp46P62069 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp46P62069 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp46P62069 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp46P62069 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp46P62069 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp46P62069 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Gm27742-201ENSMUST00000184667 60 ntBASIC17.37■□□□□ 0.37
Usp46P62069 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp46P62069 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp46P62069 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp46P62069 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp46P62069 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.37■□□□□ 0.37
Usp46P62069 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp46P62069 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Olfr129-201ENSMUST00000122318 993 ntBASIC17.36■□□□□ 0.37
Usp46P62069 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp46P62069 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp46P62069 Gm17807-201ENSMUST00000186869 298 ntBASIC17.36■□□□□ 0.37
Usp46P62069 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp46P62069 Gm45328-201ENSMUST00000210942 917 ntBASIC17.36■□□□□ 0.37
Usp46P62069 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.36■□□□□ 0.37
Usp46P62069 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.36■□□□□ 0.37
Usp46P62069 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp46P62069 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp46P62069 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp46P62069 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp46P62069 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp46P62069 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp46P62069 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp46P62069 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp46P62069 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms