Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp25P57080 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Usp25P57080 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.87■□□□□ 0.61
Usp25P57080 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.87■□□□□ 0.61
Usp25P57080 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Usp25P57080 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Usp25P57080 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp25P57080 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Dio3-201ENSMUST00000097228 1449 ntBASIC18.87■□□□□ 0.61
Usp25P57080 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp25P57080 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp25P57080 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Usp25P57080 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp25P57080 Gm12896-201ENSMUST00000118430 226 ntBASIC18.86■□□□□ 0.61
Usp25P57080 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp25P57080 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.86■□□□□ 0.61
Usp25P57080 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Usp25P57080 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp25P57080 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp25P57080 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp25P57080 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp25P57080 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp25P57080 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.84■□□□□ 0.61
Usp25P57080 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.84■□□□□ 0.61
Usp25P57080 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Usp25P57080 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp25P57080 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Usp25P57080 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp25P57080 Gm11249-201ENSMUST00000117071 859 ntBASIC18.83■□□□□ 0.6
Usp25P57080 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp25P57080 Gm24841-201ENSMUST00000158676 357 ntBASIC18.83■□□□□ 0.6
Usp25P57080 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp25P57080 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp25P57080 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp25P57080 Gm42545-201ENSMUST00000202755 922 ntBASIC18.83■□□□□ 0.6
Usp25P57080 Gm18025-201ENSMUST00000221733 862 ntBASIC18.83■□□□□ 0.6
Usp25P57080 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp25P57080 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp25P57080 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp25P57080 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp25P57080 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp25P57080 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp25P57080 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp25P57080 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp25P57080 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp25P57080 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms