Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Gm27801-201ENSMUST00000184174 223 ntBASIC13.17□□□□□ -0.3
Rab4aP56371 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.17□□□□□ -0.3
Rab4aP56371 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rab4aP56371 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Rab4aP56371 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.17□□□□□ -0.3
Rab4aP56371 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab4aP56371 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.16□□□□□ -0.3
Rab4aP56371 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rab4aP56371 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rab4aP56371 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab4aP56371 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Rab4aP56371 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.15□□□□□ -0.3
Rab4aP56371 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab4aP56371 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.15□□□□□ -0.3
Rab4aP56371 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rab4aP56371 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab4aP56371 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Gm12922-201ENSMUST00000120626 809 ntBASIC13.15□□□□□ -0.3
Rab4aP56371 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.15□□□□□ -0.3
Rab4aP56371 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.15□□□□□ -0.3
Rab4aP56371 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.15□□□□□ -0.3
Rab4aP56371 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rab4aP56371 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rab4aP56371 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Rab4aP56371 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rab4aP56371 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rab4aP56371 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rab4aP56371 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rab4aP56371 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.14□□□□□ -0.31
Rab4aP56371 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.14□□□□□ -0.31
Rab4aP56371 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Asic1-205ENSMUST00000228185 1818 ntBASIC13.14□□□□□ -0.31
Rab4aP56371 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Gm11421-201ENSMUST00000122124 294 ntBASIC13.14□□□□□ -0.31
Rab4aP56371 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rab4aP56371 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms