Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh11P55288 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cdh11P55288 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh11P55288 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh11P55288 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh11P55288 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh11P55288 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.18■□□□□ 0.02
Cdh11P55288 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh11P55288 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.18■□□□□ 0.02
Cdh11P55288 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm30025-201ENSMUST00000218555 728 ntBASIC15.18■□□□□ 0.02
Cdh11P55288 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.18■□□□□ 0.02
Cdh11P55288 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdh11P55288 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh11P55288 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdh11P55288 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh11P55288 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh11P55288 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh11P55288 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cdh11P55288 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdh11P55288 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdh11P55288 Gm13401-201ENSMUST00000117074 291 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Gm7977-201ENSMUST00000193787 748 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Gm21814-202ENSMUST00000203277 873 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdh11P55288 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdh11P55288 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.16■□□□□ 0.02
Cdh11P55288 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh11P55288 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.15■□□□□ 0.02
Cdh11P55288 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh11P55288 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh11P55288 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Cdh11P55288 Gm11643-201ENSMUST00000119578 864 ntBASIC15.15■□□□□ 0.02
Cdh11P55288 Gm43799-201ENSMUST00000201845 579 ntBASIC15.15■□□□□ 0.02
Cdh11P55288 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.15■□□□□ 0.02
Cdh11P55288 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.15■□□□□ 0.02
Cdh11P55288 Odf3b-204ENSMUST00000227834 930 ntBASIC15.15■□□□□ 0.02
Cdh11P55288 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdh11P55288 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh11P55288 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh11P55288 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdh11P55288 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Cdh11P55288 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms