Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NrlP54846 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NrlP54846 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.69■□□□□ 0.42
NrlP54846 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NrlP54846 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.69■□□□□ 0.42
NrlP54846 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.68■□□□□ 0.42
NrlP54846 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NrlP54846 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NrlP54846 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.68■□□□□ 0.42
NrlP54846 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NrlP54846 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.68■□□□□ 0.42
NrlP54846 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NrlP54846 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NrlP54846 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.67■□□□□ 0.42
NrlP54846 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NrlP54846 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.67■□□□□ 0.42
NrlP54846 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.67■□□□□ 0.42
NrlP54846 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NrlP54846 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.67■□□□□ 0.42
NrlP54846 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.67■□□□□ 0.42
NrlP54846 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.67■□□□□ 0.42
NrlP54846 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.67■□□□□ 0.42
NrlP54846 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NrlP54846 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NrlP54846 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.66■□□□□ 0.42
NrlP54846 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.66■□□□□ 0.42
NrlP54846 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.66■□□□□ 0.42
NrlP54846 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NrlP54846 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NrlP54846 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.65■□□□□ 0.42
NrlP54846 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.65■□□□□ 0.42
NrlP54846 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Gm10052-201ENSMUST00000168019 960 ntBASIC17.65■□□□□ 0.42
NrlP54846 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Gm7729-201ENSMUST00000050143 801 ntBASIC17.65■□□□□ 0.42
NrlP54846 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms