Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Pdx1P52946 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Gm13216-201ENSMUST00000117145 591 ntBASIC16.46■□□□□ 0.23
Pdx1P52946 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdx1P52946 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdx1P52946 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdx1P52946 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pdx1P52946 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.45■□□□□ 0.22
Pdx1P52946 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pdx1P52946 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pdx1P52946 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pdx1P52946 Gm18115-201ENSMUST00000221209 621 ntBASIC16.45■□□□□ 0.22
Pdx1P52946 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdx1P52946 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pdx1P52946 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pdx1P52946 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdx1P52946 Gm10013-201ENSMUST00000106074 672 ntBASIC16.44■□□□□ 0.22
Pdx1P52946 Gm11336-201ENSMUST00000118168 334 ntBASIC16.44■□□□□ 0.22
Pdx1P52946 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdx1P52946 Gm44450-201ENSMUST00000199528 114 ntBASIC16.44■□□□□ 0.22
Pdx1P52946 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdx1P52946 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pdx1P52946 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdx1P52946 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pdx1P52946 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.43■□□□□ 0.22
Pdx1P52946 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pdx1P52946 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pdx1P52946 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.43■□□□□ 0.22
Pdx1P52946 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.43■□□□□ 0.22
Pdx1P52946 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.43■□□□□ 0.22
Pdx1P52946 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pdx1P52946 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdx1P52946 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.42■□□□□ 0.22
Pdx1P52946 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pdx1P52946 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.42■□□□□ 0.22
Pdx1P52946 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.42■□□□□ 0.22
Pdx1P52946 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms