Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Gm15794-201ENSMUST00000120182 631 ntBASIC16.86■□□□□ 0.29
Lhx3P50481 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.86■□□□□ 0.29
Lhx3P50481 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.86■□□□□ 0.29
Lhx3P50481 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lhx3P50481 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lhx3P50481 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lhx3P50481 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Lhx3P50481 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx3P50481 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.85■□□□□ 0.29
Lhx3P50481 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Gm14859-201ENSMUST00000117752 357 ntBASIC16.85■□□□□ 0.29
Lhx3P50481 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.85■□□□□ 0.29
Lhx3P50481 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.85■□□□□ 0.29
Lhx3P50481 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lhx3P50481 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.85■□□□□ 0.29
Lhx3P50481 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx3P50481 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.84■□□□□ 0.29
Lhx3P50481 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx3P50481 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx3P50481 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Lhx3P50481 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.83■□□□□ 0.29
Lhx3P50481 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx3P50481 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx3P50481 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx3P50481 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Olfr129-201ENSMUST00000122318 993 ntBASIC16.83■□□□□ 0.28
Lhx3P50481 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx3P50481 Gm27742-201ENSMUST00000184667 60 ntBASIC16.83■□□□□ 0.28
Lhx3P50481 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lhx3P50481 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lhx3P50481 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx3P50481 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Lhx3P50481 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.82■□□□□ 0.28
Lhx3P50481 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.82■□□□□ 0.28
Lhx3P50481 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx3P50481 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lhx3P50481 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lhx3P50481 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lhx3P50481 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Lhx3P50481 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
Lhx3P50481 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.81■□□□□ 0.28
Lhx3P50481 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Lhx3P50481 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx3P50481 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lhx3P50481 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms