Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Gm6345-202ENSMUST00000180900 204 ntBASIC19.73■□□□□ 0.75
Ercc3P49135 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.73■□□□□ 0.75
Ercc3P49135 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.73■□□□□ 0.75
Ercc3P49135 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ercc3P49135 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ercc3P49135 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ercc3P49135 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Gm37722-201ENSMUST00000193757 208 ntBASIC19.72■□□□□ 0.75
Ercc3P49135 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ercc3P49135 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ercc3P49135 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ercc3P49135 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ercc3P49135 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ercc3P49135 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.72■□□□□ 0.75
Ercc3P49135 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.72■□□□□ 0.75
Ercc3P49135 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc3P49135 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ercc3P49135 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ercc3P49135 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 AA414768-201ENSMUST00000121924 1257 ntBASIC19.71■□□□□ 0.75
Ercc3P49135 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.71■□□□□ 0.75
Ercc3P49135 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc3P49135 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Ercc3P49135 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ercc3P49135 Gm11336-201ENSMUST00000118168 334 ntBASIC19.7■□□□□ 0.74
Ercc3P49135 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ercc3P49135 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ercc3P49135 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.69■□□□□ 0.74
Ercc3P49135 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.69■□□□□ 0.74
Ercc3P49135 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ercc3P49135 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ercc3P49135 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Ercc3P49135 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc3P49135 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.69■□□□□ 0.74
Ercc3P49135 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ercc3P49135 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms