Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
GdnfP48540 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
GdnfP48540 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GdnfP48540 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GdnfP48540 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GdnfP48540 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.58□□□□□ -0.08
GdnfP48540 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GdnfP48540 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.58□□□□□ -0.08
GdnfP48540 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.58□□□□□ -0.08
GdnfP48540 Gm37292-201ENSMUST00000192062 758 ntBASIC14.58□□□□□ -0.08
GdnfP48540 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.58□□□□□ -0.08
GdnfP48540 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.58□□□□□ -0.08
GdnfP48540 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.58□□□□□ -0.08
GdnfP48540 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GdnfP48540 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GdnfP48540 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GdnfP48540 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GdnfP48540 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
GdnfP48540 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GdnfP48540 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GdnfP48540 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.56□□□□□ -0.08
GdnfP48540 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
GdnfP48540 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Gm43183-201ENSMUST00000200632 547 ntBASIC14.56□□□□□ -0.08
GdnfP48540 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.56□□□□□ -0.08
GdnfP48540 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
GdnfP48540 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GdnfP48540 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.56□□□□□ -0.08
GdnfP48540 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GdnfP48540 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
GdnfP48540 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
GdnfP48540 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.55□□□□□ -0.08
GdnfP48540 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GdnfP48540 Gm10418-201ENSMUST00000100943 576 ntBASIC14.55□□□□□ -0.08
GdnfP48540 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GdnfP48540 Gm6576-201ENSMUST00000169678 883 ntBASIC14.55□□□□□ -0.08
GdnfP48540 Gm8520-201ENSMUST00000186517 868 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms