Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Rfx3P48381 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Gm12085-201ENSMUST00000119263 940 ntBASIC15.03■□□□□ -0
Rfx3P48381 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.03■□□□□ -0
Rfx3P48381 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.03■□□□□ -0
Rfx3P48381 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.03■□□□□ -0
Rfx3P48381 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx3P48381 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Mir1199-201ENSMUST00000117015 119 ntBASIC15.02■□□□□ -0
Rfx3P48381 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.02■□□□□ -0
Rfx3P48381 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.02■□□□□ -0
Rfx3P48381 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Rfx3P48381 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.02■□□□□ -0
Rfx3P48381 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rfx3P48381 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.02■□□□□ -0
Rfx3P48381 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
Rfx3P48381 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rfx3P48381 Gm10812-201ENSMUST00000099864 546 ntBASIC15.02■□□□□ -0
Rfx3P48381 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rfx3P48381 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx3P48381 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx3P48381 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx3P48381 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rfx3P48381 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rfx3P48381 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rfx3P48381 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx3P48381 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.01□□□□□ -0.01
Rfx3P48381 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.01□□□□□ -0.01
Rfx3P48381 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rfx3P48381 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx3P48381 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Gm17661-201ENSMUST00000170317 270 ntBASIC15.01□□□□□ -0.01
Rfx3P48381 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rfx3P48381 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.01□□□□□ -0.01
Rfx3P48381 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.01□□□□□ -0.01
Rfx3P48381 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.01□□□□□ -0.01
Rfx3P48381 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.01□□□□□ -0.01
Rfx3P48381 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rfx3P48381 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rfx3P48381 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.01□□□□□ -0.01
Rfx3P48381 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfx3P48381 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rfx3P48381 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15□□□□□ -0.01
Rfx3P48381 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15□□□□□ -0.01
Rfx3P48381 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rfx3P48381 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rfx3P48381 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rfx3P48381 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms