Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfx2P48379 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfx2P48379 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfx2P48379 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfx2P48379 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.43■□□□□ 0.38
Rfx2P48379 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfx2P48379 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx2P48379 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
Rfx2P48379 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rfx2P48379 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.42■□□□□ 0.38
Rfx2P48379 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Gm10566-201ENSMUST00000086739 996 ntBASIC17.42■□□□□ 0.38
Rfx2P48379 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rfx2P48379 Dancr-204ENSMUST00000132389 2347 ntBASIC17.42■□□□□ 0.38
Rfx2P48379 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.42■□□□□ 0.38
Rfx2P48379 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rfx2P48379 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rfx2P48379 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.42■□□□□ 0.38
Rfx2P48379 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rfx2P48379 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx2P48379 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Gm11950-201ENSMUST00000121615 838 ntBASIC17.41■□□□□ 0.38
Rfx2P48379 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.41■□□□□ 0.38
Rfx2P48379 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx2P48379 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.41■□□□□ 0.38
Rfx2P48379 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx2P48379 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx2P48379 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx2P48379 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfx2P48379 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx2P48379 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx2P48379 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx2P48379 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx2P48379 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx2P48379 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx2P48379 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Gm6623-201ENSMUST00000173570 544 ntBASIC17.39■□□□□ 0.37
Rfx2P48379 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx2P48379 Gm37722-201ENSMUST00000193757 208 ntBASIC17.39■□□□□ 0.37
Rfx2P48379 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.39■□□□□ 0.37
Rfx2P48379 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx2P48379 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rfx2P48379 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx2P48379 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms