Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Gm29707-201ENSMUST00000196325 491 ntBASIC15.26■□□□□ 0.03
Nkx2-2P42586 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-2P42586 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Gm10231-201ENSMUST00000181584 441 ntBASIC15.25■□□□□ 0.03
Nkx2-2P42586 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Gm10175-202ENSMUST00000208752 441 ntBASIC15.25■□□□□ 0.03
Nkx2-2P42586 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.25■□□□□ 0.03
Nkx2-2P42586 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-2P42586 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-2P42586 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx2-2P42586 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx2-2P42586 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms