Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.78□□□□□ -0.2
Abca1P41233 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Abca1P41233 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Abca1P41233 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Abca1P41233 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Abca1P41233 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Abca1P41233 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Abca1P41233 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.77□□□□□ -0.21
Abca1P41233 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.77□□□□□ -0.21
Abca1P41233 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Abca1P41233 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Abca1P41233 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.76□□□□□ -0.21
Abca1P41233 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abca1P41233 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abca1P41233 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abca1P41233 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.76□□□□□ -0.21
Abca1P41233 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.76□□□□□ -0.21
Abca1P41233 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.76□□□□□ -0.21
Abca1P41233 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Abca1P41233 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Abca1P41233 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.76□□□□□ -0.21
Abca1P41233 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Gm11336-201ENSMUST00000118168 334 ntBASIC13.76□□□□□ -0.21
Abca1P41233 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.76□□□□□ -0.21
Abca1P41233 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Abca1P41233 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.76□□□□□ -0.21
Abca1P41233 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.76□□□□□ -0.21
Abca1P41233 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abca1P41233 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Abca1P41233 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.75□□□□□ -0.21
Abca1P41233 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.75□□□□□ -0.21
Abca1P41233 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.75□□□□□ -0.21
Abca1P41233 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms