Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Gm11355-201ENSMUST00000121120 306 ntBASIC13.62□□□□□ -0.23
Timp3P39876 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.62□□□□□ -0.23
Timp3P39876 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.62□□□□□ -0.23
Timp3P39876 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.62□□□□□ -0.23
Timp3P39876 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.62□□□□□ -0.23
Timp3P39876 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.62□□□□□ -0.23
Timp3P39876 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Timp3P39876 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.62□□□□□ -0.23
Timp3P39876 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Timp3P39876 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Timp3P39876 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Timp3P39876 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Timp3P39876 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.61□□□□□ -0.23
Timp3P39876 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.61□□□□□ -0.23
Timp3P39876 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Timp3P39876 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.61□□□□□ -0.23
Timp3P39876 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Timp3P39876 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.6□□□□□ -0.23
Timp3P39876 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.6□□□□□ -0.23
Timp3P39876 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Timp3P39876 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.6□□□□□ -0.23
Timp3P39876 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Timp3P39876 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.6□□□□□ -0.23
Timp3P39876 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Timp3P39876 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Timp3P39876 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Timp3P39876 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.59□□□□□ -0.23
Timp3P39876 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gm26039-201ENSMUST00000158152 144 ntBASIC13.59□□□□□ -0.23
Timp3P39876 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Timp3P39876 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Gm10819-201ENSMUST00000099988 561 ntBASIC13.59□□□□□ -0.23
Timp3P39876 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Timp3P39876 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.59□□□□□ -0.23
Timp3P39876 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms