Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LdlrP35951 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LdlrP35951 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LdlrP35951 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.56■□□□□ 0.24
LdlrP35951 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.56■□□□□ 0.24
LdlrP35951 Gm21362-201ENSMUST00000194272 928 ntBASIC16.56■□□□□ 0.24
LdlrP35951 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.56■□□□□ 0.24
LdlrP35951 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.56■□□□□ 0.24
LdlrP35951 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.56■□□□□ 0.24
LdlrP35951 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LdlrP35951 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Gm24841-201ENSMUST00000158676 357 ntBASIC16.55■□□□□ 0.24
LdlrP35951 Gm43183-201ENSMUST00000200632 547 ntBASIC16.55■□□□□ 0.24
LdlrP35951 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LdlrP35951 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LdlrP35951 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LdlrP35951 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
LdlrP35951 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LdlrP35951 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.54■□□□□ 0.24
LdlrP35951 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Gm13559-201ENSMUST00000120476 863 ntBASIC16.54■□□□□ 0.24
LdlrP35951 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Gm10819-201ENSMUST00000099988 561 ntBASIC16.54■□□□□ 0.24
LdlrP35951 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.54■□□□□ 0.24
LdlrP35951 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
LdlrP35951 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LdlrP35951 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LdlrP35951 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LdlrP35951 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LdlrP35951 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LdlrP35951 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LdlrP35951 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.53■□□□□ 0.24
LdlrP35951 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.53■□□□□ 0.24
LdlrP35951 Odf3b-204ENSMUST00000227834 930 ntBASIC16.53■□□□□ 0.24
LdlrP35951 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
LdlrP35951 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LdlrP35951 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LdlrP35951 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms