Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.63■□□□□ 0.25
PdgfbP31240 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfbP31240 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PdgfbP31240 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfbP31240 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfbP31240 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
PdgfbP31240 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfbP31240 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.62■□□□□ 0.25
PdgfbP31240 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.62■□□□□ 0.25
PdgfbP31240 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.62■□□□□ 0.25
PdgfbP31240 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PdgfbP31240 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.62■□□□□ 0.25
PdgfbP31240 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
PdgfbP31240 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.62■□□□□ 0.25
PdgfbP31240 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PdgfbP31240 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PdgfbP31240 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.62■□□□□ 0.25
PdgfbP31240 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfbP31240 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.61■□□□□ 0.25
PdgfbP31240 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.61■□□□□ 0.25
PdgfbP31240 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.61■□□□□ 0.25
PdgfbP31240 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.61■□□□□ 0.25
PdgfbP31240 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.61■□□□□ 0.25
PdgfbP31240 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
PdgfbP31240 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.61■□□□□ 0.25
PdgfbP31240 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PdgfbP31240 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfbP31240 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PdgfbP31240 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PdgfbP31240 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Gm12497-201ENSMUST00000138778 237 ntBASIC16.6■□□□□ 0.25
PdgfbP31240 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.6■□□□□ 0.25
PdgfbP31240 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfbP31240 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PdgfbP31240 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PdgfbP31240 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.59■□□□□ 0.25
PdgfbP31240 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.59■□□□□ 0.25
PdgfbP31240 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PdgfbP31240 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PdgfbP31240 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.59■□□□□ 0.25
PdgfbP31240 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PdgfbP31240 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PdgfbP31240 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
PdgfbP31240 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PdgfbP31240 Mir3113-201ENSMUST00000175478 76 ntBASIC16.58■□□□□ 0.24
PdgfbP31240 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PdgfbP31240 Chchd1-203ENSMUST00000224633 557 ntBASIC16.58■□□□□ 0.24
PdgfbP31240 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PdgfbP31240 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PdgfbP31240 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.58■□□□□ 0.24
PdgfbP31240 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PdgfbP31240 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms