Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col2a1P28481 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Gm4459-201ENSMUST00000118750 468 ntBASIC18.82■□□□□ 0.6
Col2a1P28481 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.82■□□□□ 0.6
Col2a1P28481 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Col2a1P28481 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col2a1P28481 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.81■□□□□ 0.6
Col2a1P28481 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.81■□□□□ 0.6
Col2a1P28481 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.81■□□□□ 0.6
Col2a1P28481 Gm2651-201ENSMUST00000203560 838 ntBASIC18.81■□□□□ 0.6
Col2a1P28481 Gm10060-201ENSMUST00000212002 111 ntBASIC18.81■□□□□ 0.6
Col2a1P28481 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.81■□□□□ 0.6
Col2a1P28481 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Col2a1P28481 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col2a1P28481 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col2a1P28481 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.8■□□□□ 0.6
Col2a1P28481 Gm7230-201ENSMUST00000173026 815 ntBASIC18.8■□□□□ 0.6
Col2a1P28481 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.8■□□□□ 0.6
Col2a1P28481 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.8■□□□□ 0.6
Col2a1P28481 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.8■□□□□ 0.6
Col2a1P28481 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.8■□□□□ 0.6
Col2a1P28481 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col2a1P28481 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col2a1P28481 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Gm8097-201ENSMUST00000117903 829 ntBASIC18.79■□□□□ 0.6
Col2a1P28481 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.79■□□□□ 0.6
Col2a1P28481 Mir5126-201ENSMUST00000175513 77 ntBASIC18.79■□□□□ 0.6
Col2a1P28481 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Col2a1P28481 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.79■□□□□ 0.6
Col2a1P28481 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col2a1P28481 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.79■□□□□ 0.6
Col2a1P28481 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.78■□□□□ 0.6
Col2a1P28481 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.78■□□□□ 0.6
Col2a1P28481 Gm43514-201ENSMUST00000198852 424 ntBASIC18.78■□□□□ 0.6
Col2a1P28481 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col2a1P28481 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.77■□□□□ 0.6
Col2a1P28481 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col2a1P28481 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col2a1P28481 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col2a1P28481 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.77■□□□□ 0.59
Col2a1P28481 Mir5131-201ENSMUST00000175426 93 ntBASIC18.77■□□□□ 0.59
Col2a1P28481 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.77■□□□□ 0.59
Col2a1P28481 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms