Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Gm29707-201ENSMUST00000196325 491 ntBASIC15.06■□□□□ 0
Cd40P27512 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.06■□□□□ 0
Cd40P27512 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.06■□□□□ 0
Cd40P27512 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cd40P27512 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cd40P27512 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cd40P27512 Gm37722-201ENSMUST00000193757 208 ntBASIC15.05■□□□□ -0
Cd40P27512 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.05■□□□□ -0
Cd40P27512 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cd40P27512 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cd40P27512 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd40P27512 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cd40P27512 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.04■□□□□ -0
Cd40P27512 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cd40P27512 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Cd40P27512 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.04■□□□□ -0
Cd40P27512 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cd40P27512 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Cd40P27512 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Cd40P27512 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cd40P27512 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd40P27512 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cd40P27512 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cd40P27512 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cd40P27512 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.03■□□□□ -0
Cd40P27512 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.03■□□□□ -0
Cd40P27512 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.03■□□□□ -0
Cd40P27512 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cd40P27512 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40P27512 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.02■□□□□ -0
Cd40P27512 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cd40P27512 Gm9013-201ENSMUST00000132939 882 ntBASIC15.02■□□□□ -0
Cd40P27512 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.02■□□□□ -0
Cd40P27512 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40P27512 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Haglr-201ENSMUST00000100000 2085 ntBASIC15.02□□□□□ -0.01
Cd40P27512 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms