Protein–RNA interactions for Protein: P16546

Sptan1, Spectrin alpha chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1P16546 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Grk6-207ENSMUST00000225925 2769 ntBASIC14.36□□□□□ -0.11
Sptan1P16546 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sptan1P16546 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.36□□□□□ -0.11
Sptan1P16546 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.36□□□□□ -0.11
Sptan1P16546 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.36□□□□□ -0.11
Sptan1P16546 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sptan1P16546 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.35□□□□□ -0.11
Sptan1P16546 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.35□□□□□ -0.11
Sptan1P16546 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sptan1P16546 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.35□□□□□ -0.11
Sptan1P16546 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Sptan1P16546 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sptan1P16546 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sptan1P16546 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sptan1P16546 Gm23547-201ENSMUST00000158210 271 ntBASIC14.34□□□□□ -0.11
Sptan1P16546 Gm27000-201ENSMUST00000182943 842 ntBASIC14.34□□□□□ -0.11
Sptan1P16546 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.34□□□□□ -0.11
Sptan1P16546 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.34□□□□□ -0.11
Sptan1P16546 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.34□□□□□ -0.11
Sptan1P16546 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sptan1P16546 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.34□□□□□ -0.11
Sptan1P16546 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sptan1P16546 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sptan1P16546 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sptan1P16546 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sptan1P16546 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.33□□□□□ -0.11
Sptan1P16546 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sptan1P16546 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sptan1P16546 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sptan1P16546 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.33□□□□□ -0.12
Sptan1P16546 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.33□□□□□ -0.12
Sptan1P16546 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 Gm6089-201ENSMUST00000197666 938 ntBASIC14.33□□□□□ -0.12
Sptan1P16546 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Sptan1P16546 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 Idnk-204ENSMUST00000226010 1898 ntBASIC14.33□□□□□ -0.12
Sptan1P16546 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sptan1P16546 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sptan1P16546 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.33□□□□□ -0.12
Sptan1P16546 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sptan1P16546 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sptan1P16546 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.32□□□□□ -0.12
Sptan1P16546 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sptan1P16546 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sptan1P16546 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms