Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rb1P13405 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rb1P13405 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rb1P13405 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rb1P13405 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Gm17808-201ENSMUST00000200859 894 ntBASIC16.98■□□□□ 0.31
Rb1P13405 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.98■□□□□ 0.31
Rb1P13405 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rb1P13405 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rb1P13405 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rb1P13405 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rb1P13405 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rb1P13405 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rb1P13405 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Gm7153-201ENSMUST00000117092 455 ntBASIC16.97■□□□□ 0.31
Rb1P13405 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Rb1P13405 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rb1P13405 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rb1P13405 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.96■□□□□ 0.31
Rb1P13405 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.96■□□□□ 0.31
Rb1P13405 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Tgds-204ENSMUST00000228543 1594 ntBASIC16.96■□□□□ 0.31
Rb1P13405 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rb1P13405 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rb1P13405 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rb1P13405 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rb1P13405 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.95■□□□□ 0.3
Rb1P13405 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.95■□□□□ 0.3
Rb1P13405 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rb1P13405 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rb1P13405 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rb1P13405 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rb1P13405 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rb1P13405 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Rb1P13405 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rb1P13405 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rb1P13405 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.94■□□□□ 0.3
Rb1P13405 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms