Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.68■■□□□ 1.06
NeflP08551 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC21.68■■□□□ 1.06
NeflP08551 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC21.67■■□□□ 1.06
NeflP08551 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
NeflP08551 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.67■■□□□ 1.06
NeflP08551 Gm42545-201ENSMUST00000202755 922 ntBASIC21.67■■□□□ 1.06
NeflP08551 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.67■■□□□ 1.06
NeflP08551 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NeflP08551 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.66■■□□□ 1.06
NeflP08551 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.66■■□□□ 1.06
NeflP08551 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.66■■□□□ 1.06
NeflP08551 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
NeflP08551 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NeflP08551 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NeflP08551 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.65■■□□□ 1.06
NeflP08551 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
NeflP08551 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NeflP08551 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NeflP08551 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NeflP08551 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NeflP08551 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
NeflP08551 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NeflP08551 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NeflP08551 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
NeflP08551 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NeflP08551 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.64■■□□□ 1.05
NeflP08551 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NeflP08551 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NeflP08551 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.63■■□□□ 1.05
NeflP08551 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NeflP08551 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NeflP08551 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NeflP08551 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NeflP08551 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.62■■□□□ 1.05
NeflP08551 Gm10517-202ENSMUST00000192970 758 ntBASIC21.62■■□□□ 1.05
NeflP08551 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NeflP08551 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms